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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zosma32g00920.1 | ||||||||
Common Name | ZOSMA_32G00920, ZOSMA_66G00730 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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Family | bHLH | ||||||||
Protein Properties | Length: 186aa MW: 21068.9 Da PI: 6.9641 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 42.3 | 1.4e-13 | 39 | 85 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq Zosma32g00920.1 39 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAISYITELQ 85 799***********************66......*****************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 17.13 | 35 | 84 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 6.02E-20 | 38 | 101 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.95E-15 | 38 | 89 | No hit | No description |
Pfam | PF00010 | 4.4E-11 | 39 | 85 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.1E-19 | 39 | 97 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 5.7E-17 | 41 | 90 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence Send to blast |
MDVELLNDDR PAVSTVVTDE RRPRKRGRKP ANGREEPLNH VEAERQRREK LNQRFYALRA 60 VVPNISKMDK ASLLGDAISY ITELQKKLKE MESEKDVQQN SPDVDVQMGN NEVIVHVSTP 120 LETHPVSTVI NVFKETQVDV VDSKFSASNN TVFHTFVVKT QSGSEQMTMG FFFSPLLTMA 180 CERKF* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 20 | 28 | RRPRKRGRK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009781532.1 | 7e-73 | PREDICTED: transcription factor bHLH13-like | ||||
Refseq | XP_016459177.1 | 7e-73 | PREDICTED: transcription factor bHLH13-like | ||||
Swissprot | Q9ZPY8 | 2e-63 | AIB_ARATH; Transcription factor ABA-INDUCIBLE bHLH-TYPE | ||||
TrEMBL | A0A0K9NST2 | 1e-135 | A0A0K9NST2_Z | ||||
STRING | Solyc01g096050.2.1 | 2e-71 | (Solanum lycopersicum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7385 | 29 | 44 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46510.1 | 1e-64 | ABA-inducible BHLH-type transcription factor |
Link Out ? help Back to Top | |
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Phytozome | Zosma32g00920.1 |